Team Flare's plan has been thwarted by Ash & Co. and the Gym Leaders of the region, and it is time to rebuild as Lumiose City gradually returns to normal. Clemont works on rebuilding Clembot, but is disheartened to learn that it has no memories of the past. When a trainer returns to the gym for a rematch against Clembot, Clemont is unsure if it's a wise course of action due to the memory loss. Will the challenge be accepted and will the trainer win the badge?

Ash and the others came back at the wetlands and after saying goodbye to Goodra, they run into the plants that were raging wildly during the Team Flare incident, but manage to drive them back with help from Ash-Greninja. But then Team Flare scientist Xerosic returns and abducts Clemont. After officially winning, they reunite with Squishy and Zygarde, who needs Greninja's powers, leaving Ash to choose for Greninja's destiny.