On trial for murder, Ahsoka faces her greatest challenge.

While on the run in the underworld of Coruscant, pursued by Republic authorities, Ahsoka makes a deal with Asajj Ventress to find out who the actual murderer of Letta Turmond really is, leading the two to come to terms with each other in spite of their antagonistic pasts. However, will the real perpetrator's machinations cast such an alliance into doubt?

Ahsoka Tano is blamed for the murder of Letta Turmond, a key suspect in the bombing, and is detained by Admiral Tarkin. Despite Anakin's best efforts to exonerate her, she is forced to escape the military prison where she is interred and flee into the Coruscant underworld to find the actual perpetrator and prove her innocence.

After Ahsoka rescues Anakin from certain peril on Cato Neimoidia, the two are called back to Coruscant from the front lines to investigate a terrorist bombing at the Jedi Temple, where they are told that a Jedi may be responsible.

Using Duchess Satine as bait, Darth Maul lures Obi-Wan into a trap.

Maul's alliance helps the Death Watch and their leader, Pre Vizsla, conquer Mandalore and imprison Duchess Satine, but, when Vizsla's ambitions surface, how long will the alliance last?

Darth Maul and Savage Opress form an alliance with the Mandalorian terrorist group Death Watch and several crime syndicates, including Black Sun, the Pyke Syndicate, and the Hutt Cartel, in order to destroy all of their common enemies.

After believing themselves safe, Colonel Gascon and D-Squad discover that they are prisoners of the Separatists in a captured Republic cruiser, finding themselves enmeshed in thwarting a plot to destroy a Republic space station holding a strategic conference.

Colonel Gascon and D-Squad discover that Abafar, the planet they are trapped on, is Separatist-controlled, but they also discover a Republic Clone Commando named Gregor, who has been stranded on the planet as well. They must work together to get off the planet safely.

After their ship crashes on a desolate planet, D-Squad & Colonel Gascon must find a way off to get back to Coruscant, or be stranded forever.

R2-D2 is part of a team of Republic droids chosen for an important mission led by the diminutive Colonel Meebur Gascon to obtain an encryption module from a Separatist dreadnought. The droids must overcome numerous challenging obstacles to succeed in this crucial assignment.

General Grievous attacks Hondo on Florrum, so Ahsoka and Hondo must make amends in order to survive this encounter.

With Ahsoka captured by Hondo, the younglings go to Florrum to rescue her, against the wishes of Obi-Wan Kenobi. However, before he can help the younglings, he is attacked by General Grievous and defeated, but nearly kills the droid general by setting the self-destruct on the Negotiator, after being defeated by Grievous in single-combat.

While returning to Coruscant with their lightsaber crystals, the younglings are attacked by Hondo, who wants to steal their crystals and sell them. Ahsoka must defend the younglings from the pirates.

Ahsoka and Yoda take a group of younglings to a cave on Ilum to perform a Jedi rite of passage called "The Gathering", where they will each have to face an internal fear or flaw in order to retrieve a Kyber crystal so they can begin building their own lightsabers.

As a full-scale revolt embroils Onderon, the rebels strike a decisive blow against the planet's Separatist-aligned king. Unfortunately for the rebels, such victory comes at a high price.

After a rebel attempt to rescue Onderon's true king, Ramsis Dendup, an unexpected ally steps forward to halt Dendup's execution and aid the rebel cause.

Ahsoka Tano, now leading the rebels on Onderon, but forbidden to fight, puts their training to use by having them hi-jack an AAT and blow up the main power station for the capital city of Onderon, so that the rebels can wreak havoc.

On the Separatist world of Onderon, a group of rebels call for the assistance of the Jedi. Ahsoka, Anakin, Rex, and Obi-Wan go to train the rebels to fight, and see that former Separatist and Ahsoka Tano's love interest Lux Bonteri is among them, as Onderon is his homeworld.

Fueled by vengeance and rage, the newly reunited brothers Savage Opress and Darth Maul spread terror and violence across the galaxy. As the Sith brothers forcibly recruit Hondo Ohnaka and his pirates, Obi-Wan Kenobi and Adi Gallia chase them down, leading to a deadly confrontation.